FastQCFastQC Report
Mon 4 Sep 2023
EGAF00007987251

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007987251
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences90944251
Sequences flagged as poor quality0
Sequence length26
%GC50

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CGTTCGTTATCGGAATTAACCAGACA2764820.30401261977516314No Hit
GTCTCGTTCGTTATCGGAATTAACCA2138100.23510007246087494No Hit
CCACCTACTAAGAACGGCCATGCACC1246940.1371103710557801No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)