FastQCFastQC Report
Mon 4 Sep 2023
EGAF00007987341

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007987341
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences99114164
Sequences flagged as poor quality0
Sequence length26
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CGTTCGTTATCGGAATTAACCAGACA3159440.31876775957067044No Hit
CCACCTACTAAGAACGGCCATGCACC1986420.20041736920668576No Hit
GTCTCGTTCGTTATCGGAATTAACCA1937440.1954755931755627No Hit
AAGCCGCAGGCTCCACTCCTGGTGGT1166110.11765321452945918No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)