FastQCFastQC Report
Mon 4 Sep 2023
EGAF00007987434

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007987434
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences92769164
Sequences flagged as poor quality0
Sequence length26
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AAGCCGCAGGCTCCACTCCTGGTGGT1640180.17680228313796165No Hit
AGGTCCGTCTTGCGCCGGTCCAAGAA1492330.16086487531568142No Hit
CCACCTACTAAGAACGGCCATGCACC1269540.13684935222656527No Hit
CCTCTATATAAATGCGTAGGGGTTTT1221220.13164072492881362No Hit
CGTTCGTTATCGGAATTAACCAGACA1004950.10832802158268884No Hit
ACGGGTCGCGTAACTAGTTAGCATGC968040.104349328835172No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)