FastQCFastQC Report
Mon 4 Sep 2023
EGAF00007987497

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007987497
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences107137298
Sequences flagged as poor quality0
Sequence length26
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CGTTCGTTATCGGAATTAACCAGACA2038040.190226936654684No Hit
GTCTCGTTCGTTATCGGAATTAACCA1617810.1510034348635524No Hit
AGGCCGTATCGTTCCGCCTGGGCGGG1310170.12228887833254858No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)