FastQCFastQC Report
Mon 4 Sep 2023
EGAF00007987518

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007987518
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences32269391
Sequences flagged as poor quality0
Sequence length26
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TGACTTTTACTTCCTCTAGATAGTCA742620.2301313960340931No Hit
ACGCCAGTCGTCCGTTGCGCAATCCC363250.11256797502004298No Hit
AGTTGGTTCATCTGCCGTCTGTACGC359880.11152364170740005No Hit
TTGAACGTCGGTTAACAGGGGCACGC358360.11105260709754332No Hit
TAAGAGACATGCAACTTAGAAGTCGT335390.10393440644727384No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)