FastQCFastQC Report
Mon 4 Sep 2023
EGAF00007987602

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007987602
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences31549883
Sequences flagged as poor quality0
Sequence length26
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CGTTCGTTATCGGAATTAACCAGACA389240.12337288223858074No Hit
TGACTTTTACTTCCTCTAGATAGTCA355300.1126153146114678No Hit
TACGGGCGGTGTGTACAAAGGGCAGG349730.11084985640041835No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)