FastQCFastQC Report
Mon 4 Sep 2023
EGAF00007987644

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007987644
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences33509282
Sequences flagged as poor quality0
Sequence length26
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TGTTCCGTTGGTCAAGTTATTGGATC487900.14560144857774035No Hit
CAGATCACGTAGGACTTTAATCGTTG440620.13149192513286317No Hit
CGTTCGTTATCGGAATTAACCAGACA341110.101795675598182No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)