FastQCFastQC Report
Wed 31 May 2023
EGAF00008003343

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00008003343
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences251674196
Sequences flagged as poor quality0
Sequence length114
%GC34

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CTACGACGTAGAAGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA16081180.6389681681947244No Hit
CTACGACGTAGAAGAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA14862100.5905293524807764No Hit
CATTAACGGGATGCCGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA10456730.4154867748142126No Hit
CATTAACGGGATGCCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA9489470.37705375246336337No Hit
TGGATTCCCGGACTTGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA9311000.36996244144155327No Hit
TGTACCCGCTTGTGAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA9238520.36708252760247223No Hit
GCACTCCTGCATGTACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA8932010.3549036866695702No Hit
GCACTCCTGCATGTAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA8537310.33922071216232275No Hit
TGGATTCCCGGACTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA8383050.3330913591157355No Hit
TGGATTCCCGGACTTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA7150820.2841300424776166No Hit
TGTACCCGCTTGTGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA7143940.2838566731728031No Hit
CTACGACGTAGAAGATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA6588590.2617904459303408No Hit
CATTAACAGCGCCAACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA6528170.259389723052895No Hit
CATTAGAGTCTGCCACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA6054280.24056022016655218No Hit
ACCTTTATGCCACGGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA5865670.23306600729142687No Hit
CTCATTGTAACTCCTGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA5638670.2240464095890069No Hit
CATTAACGGGATGCCTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA5536960.22000507354357457No Hit
CTCATTGTAACTCCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA5470280.21735561638587692No Hit
GCACTCCTGCATGTATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA5108420.20297750350218663No Hit
CTCATTGTAACTCCTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA4571180.18163085738038873No Hit
TCATATCCGTTGTCCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA4358610.17318462000768645No Hit
TAACTCAGGGCCTATGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA4358020.17316117700044228No Hit
CATTAGAGTCTGCCAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA4324100.1718134027534551No Hit
ACCTTTATGCCACGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA4248760.16881984993010565No Hit
GTATTCCCTCAGTCACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA4223490.16781577400966446No Hit
TAACTCAGGGCCTATCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA4221980.16775577580468362No Hit
TTCCGAGGATGATCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA4205080.16708427271582504No Hit
TGTACCCGCTTGTGATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA3812110.15147003787388677No Hit
GTATTCCCTCAGTCAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA3607920.14335677067187294No Hit
ACCTTTATGCCACGGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA3485830.138505657528752No Hit
CTACGACGTAGAAGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAG3213220.12767379616462549No Hit
TGAGAACGACCCTAAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA3094860.12297089050798041No Hit
TTCCGAGGATGATCTGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA3051100.12123213458085311No Hit
GTATTCCCTCAGTCATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA2961920.11768866443503012No Hit
CATTAGAGTCTGCCATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA2902400.11532370207710924No Hit
CTACGACGTAGAAGAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAG2797820.1111683297083027No Hit
CATTAACGGGATGCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA2742860.10898455398264191No Hit
TAACTCAGGGCCTATTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA2610900.1037412671420633No Hit
TGAGAACGACCCTAACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA2596070.10315201324811227No Hit
TGTTCCCGCTCAACTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA2561570.10178119333298676No Hit
TGTACCCGCTTGTGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA2553240.10145020985782748No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)