FastQCFastQC Report
Mon 22 May 2023
EGAF00008003359

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00008003359
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences131990559
Sequences flagged as poor quality0
Sequence length114
%GC34

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CTACGACGTAGAAGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA9914750.7511711500517245No Hit
CTACGACGTAGAAGAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA8112550.6146310813033227No Hit
GCACTCCTGCATGTACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA6930210.5250534623465001No Hit
CATTAACGGGATGCCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA6305080.4776917415737288No Hit
CATTAACGGGATGCCGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA5970950.45237705221022667No Hit
GCACTCCTGCATGTAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA5807560.4399981365333865No Hit
TGGATTCCCGGACTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA4338480.32869623652400776No Hit
TGGATTCCCGGACTTGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA4247160.321777559863202No Hit
CTACGACGTAGAAGATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA3829340.29012226548718534No Hit
GCACTCCTGCATGTATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA3755780.28454913960929584No Hit
CATTAACGGGATGCCTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA3570520.27051328724200646No Hit
CTCATTGTAACTCCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA3428270.25973600126960594No Hit
CTCATTGTAACTCCTGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA3298390.24989590353958574No Hit
TGGATTCCCGGACTTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA3202980.2426673562311377No Hit
CTCATTGTAACTCCTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA2734800.20719663745041036No Hit
TTCCGAGGATGATCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA2284270.17306313552320055No Hit
TGTTCCCGCTCAACTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA2182990.16538985943684048No Hit
CATTAACGGGATGCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA1792420.1357991066618636No Hit
TGTTCCCGCTCAACTGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA1661300.12586506281862175No Hit
TGAGAACGACCCTAAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA1646900.12477407569733832No Hit
CTACGACGTAGAAGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAG1596480.12095410551295567No Hit
TGAGAACGACCCTAACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA1585160.12009646841483564No Hit
TGTTCCCGCTCAACTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA1547950.11727732738824145No Hit
TTCCGAGGATGATCTGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA1541050.11675456272595981No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)