FastQCFastQC Report
Mon 22 May 2023
EGAF00008003363

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00008003363
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences139788808
Sequences flagged as poor quality0
Sequence length114
%GC32

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ACCTTTATGCCACGGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA13979111.0000163961624167No Hit
ACCTTTATGCCACGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA11943660.8544074572837047No Hit
ACCTTTATGCCACGGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA9070170.6488480823157173No Hit
TAACTCAGGGCCTATGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA8427290.6028587066855882No Hit
TAACTCAGGGCCTATCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA7454360.5332587141024909No Hit
TACGCCTATAACTTGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA7407100.5298778998101192No Hit
TTCTTTGCCTTGCCACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA6994760.5003805454868748No Hit
TACGCCTATAACTTGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA6622660.4737618193296276No Hit
TTCTTTGCCTTGCCAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA5767070.41255591792441637No Hit
TAACTCAGGGCCTATTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA5402990.38651091437878204No Hit
CTACGACGTAGAAGAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA5125200.36663879414437817No Hit
TACGCCTATAACTTGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA4972000.3556794046058394No Hit
TTCTTTGCCTTGCCATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA4457370.31886458320754835No Hit
CCGTGTTCCTCATTAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA4200340.30047756040669577No Hit
CTACGACGTAGAAGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA4091850.29271656712317057No Hit
CATTAACAGCGCCAACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA3774640.27002447864066487No Hit
CATTAGAGTCTGCCACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA3508250.2509678743379799No Hit
TGTACCCGCTTGTGAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA3238720.23168664547164605No Hit
CCGTGTTCCTCATTATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA3128300.2237875867716105No Hit
GACAAGTGATCTGCAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA3105240.2221379554220106No Hit
CATTAGAGTCTGCCAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA2817200.20153258621391207No Hit
CCGTGTTCCTCATTACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA2769670.19813245707052599No Hit
GTATTCCCTCAGTCAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA2677200.19151747828052157No Hit
CTACGACGTAGAAGATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA2375740.1699520894405223No Hit
TTCTTTGCCTTGCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA2353460.16835825654940845No Hit
GTATTCCCTCAGTCACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA2337920.1672465795688021No Hit
GTATTCCCTCAGTCATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA2313300.16548535130223016No Hit
CATTAGAGTCTGCCATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA2295850.16423703963481825No Hit
GACAAGTGATCTGCATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA2281810.16323266738206965No Hit
GCGCTACTTCCTTGAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA2260520.16170965561134193No Hit
TTCGCCGCATTGAGTGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA2200880.1574432196317176No Hit
GACAAGTGATCTGCACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA2043100.1461561929907865No Hit
AAGTATGCCCTACGATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA2001810.1432024515152887No Hit
TTCGCCGCATTGAGTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA1958390.14009633732623286No Hit
AAGTATGCCCTACGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA1947340.1393058591643474No Hit
TGTACCCGCTTGTGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA1841690.1317480294988995No Hit
ACCTTTATGCCACGGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAC1709670.12230378271771228No Hit
TTCGCCGCATTGAGTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA1670200.11948023764534854No Hit
AAGTATGCCCTACGAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA1604140.11475453743049299No Hit
TGTTCCCGCTCAACTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA1514590.10834844517738501No Hit
GCGCTACTTCCTTGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA1510630.10806516069584053No Hit
TGGCTTCAGGTCCTATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA1459570.10441250775956255No Hit
ACCTTTATGCCACGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAC1434390.10261121906125704No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)