FastQCFastQC Report
Tue 23 May 2023
EGAF00008003410

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00008003410
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences227813180
Sequences flagged as poor quality0
Sequence length28
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CAAAAAAAAAAAAAAAAAAAAAAAAAAA14433910.6335853790373323No Hit
CCAAAAAAAAAAAAAAAAAAAAAAAAAA3964010.17400266305926637No Hit
CTCAAAAAAAAAAAAAAAAAAAAAAAAA2976270.13064520674352556No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAA2501920.10982332102119816No Hit
GAAAAAAAAAAAAAAAAAAAAAAAAAAA2325300.10207047722173054No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)