FastQCFastQC Report
Mon 22 May 2023
EGAF00008003413

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00008003413
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences235086207
Sequences flagged as poor quality0
Sequence length202
%GC44

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CCTACACCCCTTATCCCCATACTAGTTATTATCGAAACCATCAGCCTACT16321350.6942708467791987No Hit
ATTTTACCCTCCTACAAGCCTCAGAGTACTTCGAGTCTCCCTTCACCATT11808930.5023233881177894No Hit
GTCTAATAGAAAACAACCGAAACCAAATAATTCAAGCACTGCTTATTACA11628140.4946330177508032No Hit
CTATTTTACCCTCCTACAAGCCTCAGAGTACTTCGAGTCTCCCTTCACCA11169340.47511677280156217No Hit
CATTTACACCAACCACCCAACTATCTATAAACCTAGCCATGGCCATCCCC9880810.4203058157299717No Hit
CTCCTAAACACATCCGTATTACTCGCATCAGGAGTATCAATCACCTGAGC9787870.41635237238737705No Hit
CCTACAAGCCTCAGAGTACTTCGAGTCTCCCTTCACCATTTCCGACGGCA8893710.3783169635298935No Hit
CCTTATCCCCATACTAGTTATTATCGAAACCATCAGCCTACTCATTCAAC8171860.3476112063010145No Hit
CACCTACACCCCTTATCCCCATACTAGTTATTATCGAAACCATCAGCCTA7727150.3286943159536366No Hit
GCTTATTACAATTTTACTGGGTCTCTATTTTACCCTCCTACAAGCCTCAG7437660.31638010987177995No Hit
GAGTACTTCGAGTCTCCCTTCACCATTTCCGACGGCATCTACGGCTCAAC7269210.3092146533292785No Hit
GTACTTCGAGTCTCCCTTCACCATTTCCGACGGCATCTACGGCTCAACAT6965070.2962772715967977No Hit
CCCTTCACCATTTCCGACGGCATCTACGGCTCAACATTTTTTGTAGCCAC6960560.29608542707909696No Hit
GATTATAGGCTTTCGCTCTAAGATTAAAAATGCCCTAGCCCACTTCTTAC6633880.28218924813398344No Hit
CCCCTATACCTTCTGCATAATGAATTAACTAGAAATAACTTTGCAAGGAG6545810.27844296284043585No Hit
CCATAGTCTAATAGAAAACAACCGAAACCAAATAATTCAAGCACTGCTTA6485560.275880073219268No Hit
CCTTATGAGCGGGCGCAGTGATTATAGGCTTTCGCTCTAAGATTAAAAAT6020250.25608690857817956No Hit
CATTACTGCAGGCCACCTACTCATGCACCTAATTGGAAGCGCCACCCTAG5707540.24278497972448038No Hit
CTTCTTACCACAAGGCACACCTACACCCCTTATCCCCATACTAGTTATTA5493880.23369639887039395No Hit
GGCTTCCACGGACTTCACGTCATTATTGGCTCAACTTTCCTCACTATCTG5286370.22486942417680847No Hit
CTATCTGCTTCATCCGCCAACTAATATTTCACTTTACATCCAAACATCAC5146730.21892947551788947No Hit
CATCAGGAGTATCAATCACCTGAGCTCACCATAGTCTAATAGAAAACAAC4983360.2119801099177205No Hit
CCTCTACACTTATCATCTTCACAATTCTAATTCTACTGACTATCCTAGAA4944700.2103356068014658No Hit
CCCCAGGGTTGGTCAATTTCGTGCCAGCCACCGCGGTCACACGATTAACC4887440.20789990456564728No Hit
CAATAGCCCTGGCCGTACGCCTAACCGCTAACATTACTGCAGGCCACCTA4858620.20667397130619408No Hit
ACCAATAGCCCTGGCCGTACGCCTAACCGCTAACATTACTGCAGGCCACC4791060.20380013192352028No Hit
CCTCAGAGTACTTCGAGTCTCCCTTCACCATTTCCGACGGCATCTACGGC4710180.20035969188102987No Hit
GCCCTGGCCGTACGCCTAACCGCTAACATTACTGCAGGCCACCTACTCAT4663340.19836723130251532No Hit
CTCTTATACTAGTATCCTTAATCATTTTTATTGCCACAACTAACCTCCTC4652350.19789974322057952No Hit
CTATAAACCTAGCCATGGCCATCCCCTTATGAGCGGGCGCAGTGATTATA4592500.19535386863424106No Hit
CCCCTTATCCCCATACTAGTTATTATCGAAACCATCAGCCTACTCATTCA4583460.19496932884709822No Hit
TCTTACCACAAGGCACACCTACACCCCTTATCCCCATACTAGTTATTATC4513060.1919746827171362No Hit
GTATTACTCGCATCAGGAGTATCAATCACCTGAGCTCACCATAGTCTAAT4491490.19105714696396459No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA4481550.19063432334845573No Hit
GTACTGATCATTCTATTTCCCCCTCTATTGATCCCCACCTCCAAATATCT4458770.1896653171149254No Hit
ACCTTAGCCAAACCATTTACCCAAATAAAGTATAGGCGATAGAAATTGAA4445960.18912041062451615No Hit
GCCTACTCATTCAACCAATAGCCCTGGCCGTACGCCTAACCGCTAACATT4409690.18757757234136668No Hit
TCCCCATACTAGTTATTATCGAAACCATCAGCCTACTCATTCAACCAATA4366740.1857505829765674No Hit
CATTCAACCAATAGCCCTGGCCGTACGCCTAACCGCTAACATTACTGCAG4231880.1800139639838589No Hit
CAACTAACCTCCTCGGACTCCTGCCTCACTCATTTACACCAACCACCCAA4119030.17521359728263428No Hit
CCATCAGCCTACTCATTCAACCAATAGCCCTGGCCGTACGCCTAACCGCT4082460.17365799772336282No Hit
GCCCACTTCTTACCACAAGGCACACCTACACCCCTTATCCCCATACTAGT4053610.1724307883362974No Hit
CCCTATTACTATCCATCCTCATCCTAGCAATAATCCCCATCCTCCATATA4043800.1720134946071081No Hit
CTCATGCACCTAATTGGAAGCGCCACCCTAGCAATATCAACCATTAACCT4040850.17188800872524182No Hit
CTATTGATCCCCACCTCCAAATATCTCATCAACAACCGACTAATCACCAC4032220.17152090934879902No Hit
CCTAAACACATCCGTATTACTCGCATCAGGAGTATCAATCACCTGAGCTC3964080.16862239816562272No Hit
GGATAATCCTATTTATTACCTCAGAAATTTTTTTCTTCGCAGGATTTTTC3947390.16791244583736892No Hit
CTCCTGCCTCACTCATTTACACCAACCACCCAACTATCTATAAACCTAGC3818480.1624289254877467No Hit
CCTACATACTTCCCCCATTATTCCTAGAACCAGGCGACCTGCGACTCCTT3800270.16165431602714148No Hit
CCTAATTGGAAGCGCCACCCTAGCAATATCAACCATTAACCTTCCCTCTA3782900.16091543813967782No Hit
GCCTCAGAGTACTTCGAGTCTCCCTTCACCATTTCCGACGGCATCTACGG3773440.1605130325659642No Hit
ATCTATAAACCTAGCCATGGCCATCCCCTTATGAGCGGGCGCAGTGATTA3751280.15957039963641934No Hit
ATCTACGGCTCAACATTTTTTGTAGCCACAGGCTTCCACGGACTTCACGT3737700.1589927392039636No Hit
CTCATGAGCTGTCCCCACATTAGGCTTAAAAACAGATGCAATTCCCGGAC3729710.15865286388324773No Hit
TCCACGGACTTCACGTCATTATTGGCTCAACTTTCCTCACTATCTGCTTC3664670.15588621921999873No Hit
CCACAAGGCACACCTACACCCCTTATCCCCATACTAGTTATTATCGAAAC3658700.15563226982517098No Hit
CCATATATCCAAACAACAAAGCATAATATTTCGCCCACTAAGCCAATCAC3657130.15556548581346585No Hit
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT3636440.1546853831369188No Hit
CACCATAGTCTAATAGAAAACAACCGAAACCAAATAATTCAAGCACTGCT3630370.1544271799833837No Hit
ATTATACCCTAGCCAACCCCTTAAACACCCCTCCCCACATCAAGCCCGAA3551620.15107734500135944No Hit
GCATAAGCCTGCGTCAGATTAAAACACTGAACTGACAATTAACAGCCCAA3483600.14818393832863194No Hit
TTCAAGCACTGCTTATTACAATTTTACTGGGTCTCTATTTTACCCTCCTA3451630.14682401166989775No Hit
GGCATCTACGGCTCAACATTTTTTGTAGCCACAGGCTTCCACGGACTTCA3441050.14637396399866198No Hit
GTATCAATCACCTGAGCTCACCATAGTCTAATAGAAAACAACCGAAACCA3439810.14632121739069107No Hit
GACTTCACGTCATTATTGGCTCAACTTTCCTCACTATCTGCTTCATCCGC3418450.14541261453080487No Hit
GTCTCTATTTTACCCTCCTACAAGCCTCAGAGTACTTCGAGTCTCCCTTC3408410.14498553715658868No Hit
CTTATACTAGTATCCTTAATCATTTTTATTGCCACAACTAACCTCCTCGG3368580.14329126506345818No Hit
ATTACTATCCATCCTCATCCTAGCAATAATCCCCATCCTCCATATATCCA3324090.141398767814566No Hit
GCCTAGCCCCTACCCCCCAATTAGGAGGACACTGGCCCCCAACAGGCATC3320770.14125754302548255No Hit
GGCCATCCCCTTATGAGCGGGCGCAGTGATTATAGGCTTTCGCTCTAAGA3240640.1378490061732971No Hit
AGTTATTATCGAAACCATCAGCCTACTCATTCAACCAATAGCCCTGGCCG3236500.13767290056281356No Hit
ACACTAAAGGACGAACCTGATCTCTTATACTAGTATCCTTAATCATTTTT3198770.13606795740253702No Hit
GCCTATATACCGCCATCTTCAGCAAACCCTGATGAAGGCTACAAAGTAAG3181330.13532610188397826No Hit
CCATTAACCTTCCCTCTACACTTATCATCTTCACAATTCTAATTCTACTG3147930.13390534647572921No Hit
CCCTATAGAAGAACTAATGTTAGTATAAGTAACATGAAAACATTCTCCTC3080600.1310412907380823No Hit
CTAGTATCCTTAATCATTTTTATTGCCACAACTAACCTCCTCGGACTCCT2987120.12706487709846795No Hit
GTCTTGCACTCATGAGCTGTCCCCACATTAGGCTTAAAAACAGATGCAAT2979050.12672159877078626No Hit
CTACAAGCCTCAGAGTACTTCGAGTCTCCCTTCACCATTTCCGACGGCAT2972480.1264421268237145No Hit
GCCATCCCCTTATGAGCGGGCGCAGTGATTATAGGCTTTCGCTCTAAGAT2955560.12572239085043385No Hit
CCCTAGCAATATCAACCATTAACCTTCCCTCTACACTTATCATCTTCACA2891570.12300041065361185No Hit
ATCCTATTTATTACCTCAGAAATTTTTTTCTTCGCAGGATTTTTCTGAGC2881800.12258481842790547No Hit
CTTCGAGTCTCCCTTCACCATTTCCGACGGCATCTACGGCTCAACATTTT2873550.12223388333455056No Hit
GTCCCCACATTAGGCTTAAAAACAGATGCAATTCCCGGACGTCTAAACCA2851970.12131592220550821No Hit
CACCTGAGCTCACCATAGTCTAATAGAAAACAACCGAAACCAAATAATTC2809620.11951445539295294No Hit
ACCATACACAACACTAAAGGACGAACCTGATCTCTTATACTAGTATCCTT2806450.1193796112419305No Hit
CTCCTACAAGCCTCAGAGTACTTCGAGTCTCCCTTCACCATTTCCGACGG2800110.11910992293988562No Hit
AAGCTATACTAACCCCAGGGTTGGTCAATTTCGTGCCAGCCACCGCGGTC2760770.11743649426442106No Hit
CAATTATACCCTAGCCAACCCCTTAAACACCCCTCCCCACATCAAGCCCG2759170.11736843412510373No Hit
TCATTATTGGCTCAACTTTCCTCACTATCTGCTTCATCCGCCAACTAATA2738440.11648662994507372No Hit
GCATAATATTTCGCCCACTAAGCCAATCACTTTATTGACTCCTAGCCGCA2689360.11439888517151496No Hit
ATTTTACTGGGTCTCTATTTTACCCTCCTACAAGCCTCAGAGTACTTCGA2674940.11378549316591764No Hit
GATTTATAGGTAGAGGCGACAAACCTACCGAGCCTGGTGATAGCTGGTTG2665290.11337500545066007No Hit
GCTCACCATAGTCTAATAGAAAACAACCGAAACCAAATAATTCAAGCACT2653730.11288327094409244No Hit
ATCTATCACCCTATAGAAGAACTAATGTTAGTATAAGTAACATGAAAACA2641450.11236090937483201No Hit
ATGTAACACGAGAAAGCACATACCAAGGCCACCACACACCACCTGTCCAA2599680.11058411436277926No Hit
CAATTTTACTGGGTCTCTATTTTACCCTCCTACAAGCCTCAGAGTACTTC2566240.10916165745104732No Hit
CCTAATGACCTCCGGCCTAGCCATGTGATTTCACTTCCACTCCATAACGC2553120.10860356430864529No Hit
TCAGAGTACTTCGAGTCTCCCTTCACCATTTCCGACGGCATCTACGGCTC2552210.10856485510440857No Hit
AGGCACACCTACACCCCTTATCCCCATACTAGTTATTATCGAAACCATCA2548480.10840618990462507No Hit
CTTCACGTCATTATTGGCTCAACTTTCCTCACTATCTGCTTCATCCGCCA2526340.10746440772682168No Hit
CTCCAGCCTAGCCCCTACCCCCCAATTAGGAGGACACTGGCCCCCAACAG2512290.10686675462844147No Hit
CATCAAGCCCGAATGATATTTCCTATTCGCCTACACAATTCTCCGATCCG2497490.10623719833975627No Hit
AGCCATGGCCATCCCCTTATGAGCGGGCGCAGTGATTATAGGCTTTCGCT2494720.10611936922356316No Hit
CCATACTAGTTATTATCGAAACCATCAGCCTACTCATTCAACCAATAGCC2494720.10611936922356316No Hit
CATCCGTATTACTCGCATCAGGAGTATCAATCACCTGAGCTCACCATAGT2489190.10588413636704767No Hit
GGAGTATCAATCACCTGAGCTCACCATAGTCTAATAGAAAACAACCGAAA2481340.1055502163085221No Hit
CCCCTTATGAGCGGGCGCAGTGATTATAGGCTTTCGCTCTAAGATTAAAA2472680.10518184080446712No Hit
CCATATACCAATGATGGCGCGATGTAACACGAGAAAGCACATACCAAGGC2461420.10470286757402146No Hit
ATCAATCACCTGAGCTCACCATAGTCTAATAGAAAACAACCGAAACCAAA2458150.1045637696642917No Hit
GCATAATATAGCAAGGACTAACCCCTATACCTTCTGCATAATGAATTAAC2430790.10339994128196554No Hit
CCCTAGAAGTCCCACTCCTAAACACATCCGTATTACTCGCATCAGGAGTA2428040.10328296291751392No Hit
CACCATTTCCGACGGCATCTACGGCTCAACATTTTTTGTAGCCACAGGCT2419680.10292734868958094No Hit
TCCCCGTTCCAGTGAGTTCACCCTCTAAATCACCACGATCAAAAGGGACA2380110.1012441363690895No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)