FastQCFastQC Report
Mon 22 May 2023
EGAF00008003451

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00008003451
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences16352396
Sequences flagged as poor quality0
Sequence length130
%GC44

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ACCGGATGACTGACCAAGAGGCTATTCAAGATCTCTGGCAGTGGAGGAAG165834710.141308955580577No Hit
CCGGATGACTGACCAAGAGGCTATTCAAGATCTCTGGCAGTGGAGGAAGT164415910.054544911950519No Hit
TTCCGGATGACTGACCAAGAGGCTATTCAAGATCTCTGGCAGTGGAGGAA15398569.416699546659707No Hit
CATCCGGATGACTGACCAAGAGGCTATTCAAGATCTCTGGCAGTGGAGGA15088769.227247187506956No Hit
ATGACGTCTCCAACATGAGCCGCTTGGCGAGGCAGAGACTGCTGGGCCGG8699495.320009373549907No Hit
CATTGACGTCTCCAACATGAGCCGCTTGGCGAGGCAGAGACTGCTGGGCC7252944.435398947041155No Hit
TTTGACGTCTCCAACATGAGCCGCTTGGCGAGGCAGAGACTGCTGGGCCG6854574.191783271393379No Hit
TGACGTCTCCAACATGAGCCGCTTGGCGAGGCAGAGACTGCTGGGCCGGT5908003.6129262035973198No Hit
TCAAGGCCCAGCTCAGACCTACAAGCAAGACTGGGAGAACTAGCAGGTGA5458793.3382202828258314No Hit
ATCAAGGCCCAGCTCAGACCTACAAGCAAGACTGGGAGAACTAGCAGGTG5343693.2678330441606236No Hit
TCAAGGCCCAGCTCAGACCTACAAGCAAGACTGGGAGAACCAGCAGGTGA3900912.3855280901954674No Hit
ATCAAGGCCCAGCTCAGACCTACAAGCAAGACTGGGAGAACCAGCAGGTG3799972.323800133020262No Hit
CATTCAAGGCCCAGCTCAGACCTACAAGCAAGACTGGGAGAACTAGCAGG3690302.2567335086552456No Hit
TGACGTCTCCAACATGAGCCACTTGGCGAGGCAGAGACTGCTGGGCCGGT3184971.9477084581366548No Hit
TTTCAAGGCCCAGCTCAGACCTACAAGCAAGACTGGGAGAACTAGCAGGT3125591.9113957367470797No Hit
CATTCAAGGCCCAGCTCAGACCTACAAGCAAGACTGGGAGAACCAGCAGG2620211.6023401096695553No Hit
TTTCAAGGCCCAGCTCAGACCTACAAGCAAGACTGGGAGAACCAGCAGGT2220281.3577704453830497No Hit
ATGACGTCTCCAACATGAGCCACTTGGCGAGGCAGAGACTGCTGGGCCGG2087411.2765162976728301No Hit
ACCGGATGACTGACCAAGAGGCTATTCAAGATCTCTGTCTGGCAGTGGAG1889871.1557144286378584No Hit
CCGGATGACTGACCAAGAGGCTATTCAAGATCTCTGTCTGGCAGTGGAGG1885611.1531093058167134No Hit
TTTGACGTCTCCAACATGAGCCACTTGGCGAGGCAGAGACTGCTGGGCCG1777021.086703135124663No Hit
TTCCGGATGACTGACCAAGAGGCTATTCAAGATCTCTGTCTGGCAGTGGA1773221.0843793166457074No Hit
CATCCGGATGACTGACCAAGAGGCTATTCAAGATCTCTGTCTGGCAGTGG1726671.055912540278501No Hit
CATTGACGTCTCCAACATGAGCCACTTGGCGAGGCAGAGACTGCTGGGCC1502290.9186971744079583No Hit
CAGAGCTGCTGGCAGGGATCACTGGCACTGAAGTGGACTGCCTGCGGGCC1092680.6682078883119025No Hit
ACAGAGCTGCTGGCAGGGATCACTGGCACTGAAGTGGACTGCCTGCGGGC903910.5527691477138885No Hit
CATCAGAGCTGCTGGCAGGGATCACTGGCACTGAAGTGGACTGCCTGCGG614190.37559633462888253No Hit
TTCAGAGCTGCTGGCAGGGATCACTGGCACTGAAGTGGACTGCCTGCGGG613130.37494811157948965No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG512520.3134219596932462No Hit
AGTTCGCCTGCTGGTCAGTGTGGATGAGGCTGACTATGAGGCTGGCCGGC341750.20899078031133786No Hit
TTGTTCGCCTGCTGGTCAGTGTGGATGAGGCTGACTATGAGGCTGGCCGG313340.19161717952525123No Hit
GTTCGCCTGCTGGTCAGTGTGGATGAGGCTGACTATGAGGCTGGCCGGCG292680.1789829453738767No Hit
CATGTTCGCCTGCTGGTCAGTGTGGATGAGGCTGACTATGAGGCTGGCCG215610.13185223743358465No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)