FastQCFastQC Report
Sun 11 Jun 2023
EGAF00008008864

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00008008864
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences116243441
Sequences flagged as poor quality0
Sequence length51
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG19055411.6392675437059714No Hit
GGGAGATACCATGATCACGAAGGTGGTTTTCCCAGGGCGAGGCTTATCCAT1408800.12119393471843283No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)