FastQCFastQC Report
Sun 11 Jun 2023
EGAF00008008902

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00008008902
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences104448428
Sequences flagged as poor quality0
Sequence length51
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG10465891.0020150805907773No Hit
GGGAGATACCATGATCACGAAGGTGGTTTTCCCAGGGCGAGGCTTATCCAT1171240.1121357230958038No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)