FastQCFastQC Report
Sun 11 Jun 2023
EGAF00008009011

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00008009011
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences74635146
Sequences flagged as poor quality0
Sequence length51
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CCCCACTACCACAAATTATGCAGTCGAGTTTCCCACATTTGGGGAAATCGC1572310.21066616524070308No Hit
CCGGGGCTCCCGCCGGCTTCTCCGGGATCGGTCGCGTTACCGCACTGGACG967530.1296346362074511No Hit
CCCACTACCACAAATTATGCAGTCGAGTTTCCCACATTTGGGGAAATCGCA835120.1118936646817841No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)