FastQCFastQC Report
Sun 11 Jun 2023
EGAF00008009212

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00008009212
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences96955517
Sequences flagged as poor quality0
Sequence length51
%GC44

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG5874000.6058448432594093No Hit
GGGAGATACCATGATCACGAAGGTGGTTTTCCCAGGGCGAGGCTTATCCAT1395070.14388763457369838No Hit
AGGGGAGATACCATGATCACGAAGGTGGTTTTCCCAGGGCGAGGCTTATCC1105300.11400073293405263No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)