FastQCFastQC Report
Sun 11 Jun 2023
EGAF00008009325

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00008009325
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences102987526
Sequences flagged as poor quality0
Sequence length51
%GC43

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CCCCACTACCACAAATTATGCAGTCGAGTTTCCCACATTTGGGGAAATCGC1895600.18406112600471633No Hit
CCCACTACCACAAATTATGCAGTCGAGTTTCCCACATTTGGGGAAATCGCA1172320.11383126146752957No Hit
CTGGAGTCTTGGAAGCTTGACTACCCTACGTTCTCCTACAAATGGACCTTG1040670.10104815994900199No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)