FastQCFastQC Report
Sat 11 May 2024
EGAF00008011262

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00008011262
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences34015154
Total Bases3.1 Gbp
Sequences flagged as poor quality0
Sequence length35-101
%GC43

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN4010601.1790627201041042No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)