FastQCFastQC Report
Sun 11 Jun 2023
EGAF00008015441

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00008015441
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences4632826
Sequences flagged as poor quality0
Sequence length0-101
%GC51

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[FAIL]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
436980.9432255819666009No Hit
GTCTGGAGTCTTGGAAGCTTGACTACCCTACGTTCTCCTACAAATGGACC57860.12489137299782034No Hit
GCTCAGGCTGGAGTGCAGTGGCTATTCACAGGCGCGATCCCACTACTGAT46560.10050021304491039No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)