FastQCFastQC Report
Sun 11 Jun 2023
EGAF00008015464

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00008015464
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences6017391
Sequences flagged as poor quality0
Sequence length0-101
%GC51

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[FAIL]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
1356572.254415576451655No Hit
GCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAG89860.149333822581913No Hit
GCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAG85930.14280275288742247No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)