FastQCFastQC Report
Sun 11 Jun 2023
EGAF00008016034

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00008016034
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences5609814
Sequences flagged as poor quality0
Sequence length35-101
%GC49

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN717851.2796324441416418No Hit
GCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAG63670.11349752416033758No Hit
GCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAG60450.10775758340650866No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)