FastQCFastQC Report
Sun 11 Jun 2023
EGAF00008016918

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00008016918
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences4084151
Sequences flagged as poor quality0
Sequence length35-101
%GC53

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN367740.9004074531034724No Hit
GCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAG59580.14588099215724393No Hit
GCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAG59290.14517093026188307No Hit
GTTGACTATTCTCTACAAACCACAAAGACATTGGAACACTATACCTATTA51600.12634204758834822No Hit
CACAGACTCAGAGAGAACCCACCATGGTGCTGTCTCCTGCCGACAAGACC50300.12315901150569604No Hit
ATTCTCTACAAACCACAAAGACATTGGAACACTATACCTATTATTCGGCG43170.10570128283699598No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)