FastQCFastQC Report
Sun 11 Jun 2023
EGAF00008018400

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00008018400
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences7389568
Sequences flagged as poor quality0
Sequence length101
%GC47

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTCTGGAGTCTTGGAAGCTTGACTACCCTACGTTCTCCTACAAATGGACC145380.1967368051826575No Hit
GCTCAGGCTGGAGTGCAGTGGCTATTCACAGGCGCGATCCCACTACTGAT128120.17337955344615544No Hit
CTGGAGTCTTGGAAGCTTGACTACCCTACGTTCTCCTACAAATGGACCTT119650.16191744903084998No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)