FastQCFastQC Report
Sun 11 Jun 2023
EGAF00008020256

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00008020256
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences7791310
Sequences flagged as poor quality0
Sequence length0-101
%GC51

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[FAIL]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTTTGATCCTGGCTCAGGATGAACGCTAGCTACAGGCTTAACACATGCAA269090.3453719592725742No Hit
GGCGGATGCCTTGGCTCTCGGAGGCGATGAAGGACGTGATAAGCTGCGAT196700.25246075435324744No Hit
GTGAAATAGAACCTGAAACCGTGTGCCTACAACCGCTCAGAGCCCCTTAT142490.18288323786372254No Hit
GCCACATACTTTGAGCTCGGCAGTCAGACTACGAATGATAAGATCCGTGG119540.15342734405382408No Hit
GTTTGATCCTGGCTCAGGATGAACGCTGGCGGCGTGCTTAACACATGCAA103850.13328952384130524No Hit
GTCGTACCGTAAGGAGCGGTGGACTGGTTACGAGTGAGAATGTTGGCATC98360.1262432119887413No Hit
GAGCGTCGTAACCGGGCTGAAGTCGTACCGTAAGGAGCGGTGGACTGGTT96410.12374042362580877No Hit
CATACTTTGAGCTCGGCAGTCAGACTACGAATGATAAGATCCGTGGTCAA93890.12050605097217283No Hit
92170.11829846328794515No Hit
CCAGGAGGAAGGTGGGGATGACGTCAAATCATCATGCCCCTTATGTGTAG90290.11588551860983584No Hit
GGTGAATGCCTTGGCATCAGGAGCCGATGAAGGACGTGATAAGCTGCGAT88540.11363942648925535No Hit
GACCGAACCACGTTGCTGTTGAAAAAGCATGGGATGAGCTGTGGATAGCG87410.11218909271996623No Hit
CACATACTTTGAGCTCGGCAGTCAGACTACGAATGATAAGATCCGTGGTC84040.10786376103633408No Hit
AATGACGGTACCCAAGGAGGAAGCCACGGCTAACTACGTGCCAGCAGCCG79280.10175439046835513No Hit
GTCGGCTTAAGTGCCATAACGAGCGCAACCCTTATCTTTAGTTACTAACA78890.10125383279576863No Hit
GCCACGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGTGGCGAGC78390.10061209218988848No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)