FastQCFastQC Report
Sun 11 Jun 2023
EGAF00008020294

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00008020294
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences4521697
Sequences flagged as poor quality0
Sequence length0-101
%GC51

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[FAIL]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
184270.40752398933409295No Hit
GCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAG144740.32010105940314004No Hit
GCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAG77970.17243526047853272No Hit
GTTGACTATTCTCTACAAACCACAAAGACATTGGAACACTATACCTATTA57920.12809350117887155No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)