FastQCFastQC Report
Sun 11 Jun 2023
EGAF00008020349

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00008020349
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences4637663
Sequences flagged as poor quality0
Sequence length0-101
%GC51

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[FAIL]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
559281.2059522220566694No Hit
GCTCAGGCTGGAGTGCAGTGGCTATTCACAGGCGCGATCCCACTACTGAT80720.17405318152698893No Hit
GTCTGGAGTCTTGGAAGCTTGACTACCCTACGTTCTCCTACAAATGGACC46450.1001582046819702No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)