FastQCFastQC Report
Sun 11 Jun 2023
EGAF00008020380

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00008020380
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences4278697
Sequences flagged as poor quality0
Sequence length0-101
%GC52

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[FAIL]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
962872.250381366102811No Hit
GCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAG112270.26239296683078983No Hit
GCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAG67610.1580153958085838No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)