FastQCFastQC Report
Sun 11 Jun 2023
EGAF00008020636

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00008020636
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences4696262
Sequences flagged as poor quality0
Sequence length0-101
%GC50

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[FAIL]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
177410.37776853165347246No Hit
GCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAG98640.2100393887734543No Hit
GCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAG62240.1325309363063645No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)