FastQCFastQC Report
Sun 11 Jun 2023
EGAF00008020718

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00008020718
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences4180888
Sequences flagged as poor quality0
Sequence length0-101
%GC53

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[FAIL]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
727361.7397261060329767No Hit
GCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAG68530.16391254680823786No Hit
GCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAG55480.13269908210887255No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)