FastQCFastQC Report
Sun 11 Jun 2023
EGAF00008020724

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00008020724
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences4947826
Sequences flagged as poor quality0
Sequence length0-101
%GC56

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[FAIL]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
363140.7339385014751934No Hit
GCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAG91340.18460633013367891No Hit
GCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAG74500.15057118015063586No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)