FastQCFastQC Report
Sun 11 Jun 2023
EGAF00008021003

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00008021003
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences29704414
Sequences flagged as poor quality0
Sequence length0-100
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[FAIL]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG627320.2111874686368161No Hit
CACACACACACACACACACACACACACACACACACACACACACACACACA596900.200946566392456No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)