FastQCFastQC Report
Sun 11 Jun 2023
EGAF00008021035

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00008021035
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences29164321
Sequences flagged as poor quality0
Sequence length0-100
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[FAIL]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG500030.17145264585450148No Hit
CACACACACACACACACACACACACACACACACACACACACACACACACA458260.15713035115749824No Hit
TCGAGTGATAACACTGCGGCCAACTTACTTCTGACAACGATCGGAGGACC376350.12904466385485197No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)