FastQCFastQC Report
Sat 11 May 2024
EGAF00008021045

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00008021045
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences29522202
Total Bases2.5 Gbp
Sequences flagged as poor quality0
Sequence length0-100
%GC50

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[FAIL]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG521520.17665348946531834No Hit
CACACACACACACACACACACACACACACACACACACACACACACACACA471810.15981531458933856No Hit
TCGAGTGATAACACTGCGGCCAACTTACTTCTGACAACGATCGGAGGACC384160.13012579481706685No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)