FastQCFastQC Report
Sun 11 Jun 2023
EGAF00008025452

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00008025452
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences68498075
Sequences flagged as poor quality0
Sequence length101
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG1693590.2472463642226442No Hit
GGACAGGCTGCATCAGAAGAGGCCATCAAGCAGATCACTGTCCTTCTGCC920840.1344329749412666No Hit
AGGACAGGCTGCATCAGAAGAGGCCATCAAGCAGATCACTGTCCTTCTGC725050.10584968993654202No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)