FastQCFastQC Report
Sun 11 Jun 2023
EGAF00008034006

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00008034006
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences4779745
Sequences flagged as poor quality0
Sequence length36
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG1186822.483019491625599No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGT123120.25758696332126507No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTGG64690.13534194815832226No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTG58200.12176381794426272No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)