FastQCFastQC Report
Fri 4 Aug 2023
EGAF00008034747

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00008034747
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences12115779
Sequences flagged as poor quality0
Sequence length35-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG340860.2813356037610128No Hit
CGCAAAACTAACCCCCTAATAAAATTAATTAACCACTCATTCATCGACCT226380.18684725101043853No Hit
GTTGACTATTCTCTACAAACCACAAAGACATTGGAACACTATACCTATTA131060.10817298664823781No Hit
ATCACATGCCTATCATATAGTAAAACCCAGCCCATGACCCCTAACAGGGG128790.10629939684439606No Hit
CACATGCCTATCATATAGTAAAACCCAGCCCATGACCCCTAACAGGGGCC122300.10094274581931546No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)