FastQCFastQC Report
Mon 3 Jul 2023
EGAF00008039476

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00008039476
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences123568764
Sequences flagged as poor quality0
Sequence length101
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN3187720.2579713429843808No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG1568780.1269560323513473No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)