FastQCFastQC Report
Wed 31 May 2023
EGAF00008045652

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00008045652
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1891330
Sequences flagged as poor quality0
Sequence length36-51
%GC54

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGTAGGCACACGCTGAGCCAGTCAGTGTAGCGCGCGTGCAGCCCCGGAC23000.1216075460125943No Hit
GCCATGCACCACCACCCACGGAATCGAGAAAGAGCTATCAATCTGTCAATC22190.11732484547910729No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)