FastQCFastQC Report
Thu 1 Jun 2023
EGAF00008045718

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00008045718
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences617840
Sequences flagged as poor quality0
Sequence length35-51
%GC54

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGTAGGCACACGCTGAGCCAGTCAGTGTAGCGCGCGTGCAGCCCCGGAC9250.14971513660494626No Hit
GCCATGCACCACCACCCACGGAATCGAGAAAGAGCTATCAATCTGTCAATC7450.12058138029263239No Hit
GTGTAGCGCGCGTGCAGCCCCGGACATCTAAGGGCATCACAGACCTGTTAT6500.10520523112780007No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)