FastQCFastQC Report
Wed 31 May 2023
EGAF00008046701

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00008046701
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences342667
Sequences flagged as poor quality0
Sequence length38-51
%GC50

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT3640.1062255776015782No Hit
GCCTAGTACTGTGCGCCAATTAGGTCGTCATTGCGCCAGCTCGTCAGCGCT3560.10389094952242264No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)