FastQCFastQC Report
Thu 1 Jun 2023
EGAF00008046719

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00008046719
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences661513
Sequences flagged as poor quality0
Sequence length40-51
%GC49

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GCCTAGTACTGTGCGCCAATTAGGTCGTCATTGCGCCAGCTCGTCAGCGCT10810.1634132662547826No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT7220.10914373564843019No Hit
GTACTAGGCATCGTCATCCAATGCGACGAGTCCTACACTATCTTGGATATG6650.10052712493934358No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)