FastQCFastQC Report
Wed 31 May 2023
EGAF00008046904

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00008046904
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences894412
Sequences flagged as poor quality0
Sequence length38-51
%GC50

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT14900.16658989369552288No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT12150.13584343680540958No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT11280.12611637589835556No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)