FastQCFastQC Report
Sun 11 Jun 2023
EGAF00008054891

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00008054891
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences37056781
Sequences flagged as poor quality0
Sequence length151
%GC52

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CTGGGAAGTATTCAGGCTTACCGGGTGGTCCCGGCAGATTCACAGCAGAT2572280.6941455600258426No Hit
CCACGGGCCCGCTGCTACTCGGGAACACCATCAAGACAGACGTCGGGTTT2169720.5855122710199788No Hit
CACGGGCCCGCTGCTACTCGGGAACACCATCAAGACAGACGTCGGGTTTT1160680.3132166282872762No Hit
GGGAAGTATTCAGGCTTACCGGGTGGTCCCGGCAGATTCACAGCAGATTC1114260.3006899061200162No Hit
AGCAGATTCCACGGGCCCGCTGCTACTCGGGAACACCATCAAGACAGACG825070.2226502080685314No Hit
CAGCAGATTCCACGGGCCCGCTGCTACTCGGGAACACCATCAAGACAGAC732790.19774788317420233No Hit
GCCGGTTAGTGCCAGTTCCCTGCACCTATTACTAGGCTTCCAGGTCTGGT516690.13943197062907328No Hit
GAAGTATTCAGGCTTACCGGGTGGTCCCGGCAGATTCACAGCAGATTCCA489980.13222411304424958No Hit
CCCGCTGCTACTCGGGAACACCATCAAGACAGACGTCGGGTTTTCACGTA473100.1276689413470641No Hit
CGGCCGGTTAGTGCCAGTTCCCTGCACCTATTACTAGGCTTCCAGGTCTG466930.1260039289435313No Hit
CAGGCTTACCGGGTGGTCCCGGCAGATTCACAGCAGATTCCACGGGCCCG461360.12450083022591736No Hit
TCCACGGGCCCGCTGCTACTCGGGAACACCATCAAGACAGACGTCGGGTT434570.11727138414963781No Hit
GTCACTGGGAAGTATTCAGGCTTACCGGGTGGTCCCGGCAGATTCACAGC418900.11304273838572217No Hit
GGCCGGTTAGTGCCAGTTCCCTGCACCTATTACTAGGCTTCCAGGTCTGG373760.10086143208175584No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)