FastQCFastQC Report
Sun 11 Jun 2023
EGAF00008055071

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00008055071
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences34804052
Sequences flagged as poor quality0
Sequence length151
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GATCGGAAGAGCACACGTCTGAACTCCAGTCACATTGGCTCATCTCGTAT1903350.5468759786935153TruSeq Adapter, Index 12 (97% over 37bp)
GTGGGAAGAAAGTTAGATTTACGCCGATGAATATGATAGTGAAATGGATT371540.10675193796400488No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)