FastQCFastQC Report
Mon 12 Jun 2023
EGAF00008060784

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00008060784
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences198610895
Sequences flagged as poor quality0
Sequence length8-101
%GC35

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AGANNNNN12412110.6249460786126562No Hit
AGNNNNNN8176550.41168688152782357No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)