FastQCFastQC Report
Mon 12 Jun 2023
EGAF00008061302

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00008061302
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences420737903
Sequences flagged as poor quality0
Sequence length150
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GATCGGAAGAGCACACGTCTGAACTCCAGTCACGCTTAATGATCTCGTAT61474821.461119132877363TruSeq Adapter, Index 8 (97% over 37bp)
AGATCGGAAGAGCACACGTCTGAACTCCAGTCACGCTTAATGATCTCGTA11102370.2638785315236978TruSeq Adapter, Index 8 (97% over 37bp)
ATCGGAAGAGCACACGTCTGAACTCCAGTCACGCTTAATGATCTCGTATG8713950.2071111240006347TruSeq Adapter, Index 8 (97% over 36bp)

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)