FastQCFastQC Report
Sun 11 Jun 2023
EGAF00008066279

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00008066279
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences99
Sequences flagged as poor quality0
Sequence length105
%GC51

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGTTCCGACTACCCTCCCGACTGCCTATGATGTTTATCCTTTGGATGGT1212.121212121212121No Hit
TTGCATCTCGGCAATCTCTTTCTGATTGTCCAGTTGCATTTTAGTAAGCT77.07070707070707No Hit
TATGGTTCGTTCTTATTACCCTTCTGAATGTCACGCTGATTATTTTGACT66.0606060606060606No Hit
TGTGCCAGCACGATCCAATCTCGCATACCAAATCAAACCACGAAAACCCT11.0101010101010102No Hit
TGTGCCAGCACGATCCAATCTCGCATACGTACAGACCCTTTAATCTGTCT11.0101010101010102No Hit
TGTGCCAGCACGATCCAATCTCGCACAGATCGTATCTTCATTGATTGGGC11.0101010101010102No Hit
TGTGACAGCAAGATCCAATCTCGTATAGGTGATTCAAAAACGAAAAAGAT11.0101010101010102No Hit
TGTGCTAGCACGATCCAATCTCGCATAGATCAACAAGGAGAGAAGCTCCT11.0101010101010102No Hit
TGTGCCAGCACGATCCAATCTCGCATACATCCACGAACCGCGAACACGCT11.0101010101010102No Hit
TGTGATAGAAAGAGATAAGATCGAATATCATGTATCAGTTTAAGGATGAT11.0101010101010102No Hit
TGTGACAGCAAGATCCAATCTCGTATATGATGTACCGGTGAGAATATGGT11.0101010101010102No Hit
TGTGCCAGCACGATCCAATCTCGCATAATACTTGAAACCACGAAAACCCT11.0101010101010102No Hit
TGTGCCAGCACGATCCAATCTCGCATACTTTTTTTAGGCACGAAAATGCT11.0101010101010102No Hit
AGTGCCAGCACGATCCAATCTCGCATATTTTCAGTCCAAGAAGAGATGAT11.0101010101010102No Hit
TGTGCCAGCACGATCCAATCTCGCATAGTTCCATCCCACAAGAACATGTT11.0101010101010102No Hit
TGTGCCAGCACGATCCAATCTCGCATATCTATAGTCGGCGAGAACATGGT11.0101010101010102No Hit
TGTGCCAGCACGATCCAATCTCGCATAACAGTAACAACCACGAAAACCCT11.0101010101010102No Hit
TGTGCTAGCACGATCCAATCTCGCATACGTCATATAACCAAGAACATCCT11.0101010101010102No Hit
TGTGACAGCAAGATCCAATCTCGTATAATAGATGACGGTGTGAAAATGGT11.0101010101010102No Hit
TGTGCCAGCACGATCCAATCTCGCATAGCTGGACTCGGCGCGAACACGGT11.0101010101010102No Hit
TGCTGTATCAGGGGCAGATTTGAAACAAAGTATAACTAAATTAAGAAATT11.0101010101010102No Hit
TGTGCCAGCACGATCCAATCTCGCATACCACGTATCAGCGCGAACATGGT11.0101010101010102No Hit
TGTGCCAGCACGATCCAATCTCGCATAGTTATATTAACCACGAACACCCC11.0101010101010102No Hit
TGTGCCAGCACGATCCAATCTCGCGTAACAAAACGCCGCGACTACACTGT11.0101010101010102No Hit
TGTGCCAGCACGATCCAATCTCGCATAAGAGCATAGATGTCTCTCAATGA11.0101010101010102No Hit
TGTGCCAGCACGATCCAATCTCGCATAGATTGTTGAGACATTGAAGCTGA11.0101010101010102No Hit
TGTGCCATCACGATCCAATCTCGCATACGAACACAAACCACGAAAACCCT11.0101010101010102No Hit
TGTGCCAGCACGATCCAATCTCGCATACTAACAGTCTGCGAGAACATGGT11.0101010101010102No Hit
TGTGACAGCAAGATCCAATCTCGAATAAGAAATAGGTAGATAAGGTAATG11.0101010101010102No Hit
TGTGCCAGCACGATCCAATCTCGCATATGTAGACTAAGCACGAAAATGCT11.0101010101010102No Hit
TGTGCCAGCACGATCCAATCTCGCATAAGTATTTCAACCACGAAAACCCT11.0101010101010102No Hit
TGTGCCAGCACGATCCAATCTCGCATACATTGATCTGCCACGAACATCGT11.0101010101010102No Hit
TGTGCCAGCACGATCCAATCTCGCATAACTACATATTGCGATGACTCCGT11.0101010101010102No Hit
TGTGCCAGCACGATCCAATCTCGCGTAACACTTTGGAACAGATGCTGAGC11.0101010101010102No Hit
GTGCCAGCACGATCCAATCTCGCATAGGTGATCACGAAGCAGGTCTCCTC11.0101010101010102No Hit
GTGCCAGCACGATCCAATCTCGCATAATAACACGCGGCGAGAACATGGTG11.0101010101010102No Hit
GTGCCAGTACGATCCAATCTCGCATAACTATTACGGCGAGAACATGGTGC11.0101010101010102No Hit
TGTGCCAGCACGATCCAATCTCGCATATGACGACAAGCCGAGAAAATCCG11.0101010101010102No Hit
GTGCCAGCACGATCCAATCTCGCATATCAATAGGGAAGGTCTGATGAGAA11.0101010101010102No Hit
TGTGCCAGCACGATCCAATCTCGCATATCATGTACCACCAAGAACATGGT11.0101010101010102No Hit
TGTGCCAGCACGATCCAATCTCGCATATCAAGACTTTCATCACAAACACT11.0101010101010102No Hit
TGTGCCAGCACGATCCAATCTCGCATATCATTTTCTGTCACTTGTCGTTT11.0101010101010102No Hit
TGTGCCAGCACGATCCAATCTCGCATAGGTGTAACCAGTAGTGCTTCCTT11.0101010101010102No Hit
TGTGCTAGCACGATCCATCTCGCATATATCGACCCGGCGAGAACATGGTG11.0101010101010102No Hit
TGTGCCAGCACGATCCAATCTCGCATATATAGTACCACCACGAAAACCCT11.0101010101010102No Hit
TGTGCCAGCACGATCCAATCTCGCATACCTTAAATCGGCGAGAACATGGT11.0101010101010102No Hit
TGTGCCAGCACGATCCAATCTCGCATAGAATCATGCGGCGAGAACATGGT11.0101010101010102No Hit
GTGCCAGCACGATCCAATCTCGCATACCACGTGGCGGCGAGAACATGGTG11.0101010101010102No Hit
TGTGCCAGCACGAGCCAATCTCGCATAAATGAACGGAAGCAAGAAGGAAG11.0101010101010102No Hit
TGTGCCAGCACGATCCAATCTCGCATAAAATCTAGGTGTTCATTGTTTCT11.0101010101010102No Hit
GTGCCAGCACGATCCAATCTCGCATACCATTTCCCGGCGAGAACATGGTG11.0101010101010102No Hit
TGTGCCAGCACGATCCAATCTCGCATAATTGGACACTATGAACGCTAGGA11.0101010101010102No Hit
TGTGCCAGCACGATCCAATCTCGCATATCAAATTACGGCGAGAACATGGT11.0101010101010102No Hit
TGTGACAGCAAGATCCAATCTCGAATAATTAGAACTGATGTAAAAGGATA11.0101010101010102No Hit
TGTGCCAGCACGATCCAATCTCGCATACTACGACTCGGCGAGAACATGGT11.0101010101010102No Hit
TGTGACAGCAAGATCCAATCTCGAATATATGAATACAGGGCTAATTAAGA11.0101010101010102No Hit
TGTGCCAGCACGATCCAATCTCGCATAAGTTCAAATGTGTCTCTGTACTG11.0101010101010102No Hit
TGTGCTAGCACGATCCAATCTCGCATAGGATATATTGTTTGATCCTGGGA11.0101010101010102No Hit
TGTGAAAGAAGGAGAAAATTTAGAATAGGTACATATACAGAAAAGAGGTG11.0101010101010102No Hit
TGTGCCAGCACGATCCAATCTCGCATAATTTGACCCACCACGAACATCCT11.0101010101010102No Hit
TGTGCCAGCACGATCCAATCTCGCATACCACAACACGCCCAAAGAAACGT11.0101010101010102No Hit
TGTGCCAGCACGATCCAATCTCGCATATGACGTTCGGCGGATAACACCCT11.0101010101010102No Hit
GTGCCAGCACGATCATCTCGCATACTTATACCCGGCGAGAACATGGTGCG11.0101010101010102No Hit
TGTGCCAGCACGATCCAATCTCGCATATGACTTTCCGGCGAGAACATGGT11.0101010101010102No Hit
TGTGCCAGCACGATCCAATCTCGCATATCACCTCACGAATTGTGGTTTTT11.0101010101010102No Hit
TGTGCCAGCACGATCCAATCTCGCATATCTGGAATGATGGACTGAAAGTT11.0101010101010102No Hit
TGTGCCAGCACGATCCAATCTCGCATATATTCACTCGGCGAGAACATGGT11.0101010101010102No Hit
TGTGCCAGCACGATCCAATCTCGCATACTTCGTCTCGGCGAGAACCTGGT11.0101010101010102No Hit
TGTGCCAGCACGATCCAATCTCGCATAAAACATAGAACCACGAAAACCCT11.0101010101010102No Hit
TGTGCCAGCACGATCCAATCTCGCATACCTCGAACCGGCGAGAACATGGT11.0101010101010102No Hit
TGTGCCAGCACGATCCAATCTCGCATAGTTGTAACAACCCTTGCTATAGA11.0101010101010102No Hit
TGTGCCAGCACGATCCAATCTCGCATACTATTACTCACCACGAACACCCT11.0101010101010102No Hit
TGTGCCAGCACGATCCAATCTCGCATAGATTGACTCGGCGCGTTTATGGT11.0101010101010102No Hit
GTGCCAGCACGATCCAATCTCGCATACTACTTATCGGCGAGAACATGGTG11.0101010101010102No Hit
TGTGCCAGCACGATCCAATCTCGCATAGTTTTAAACGGTGAGAACATGGT11.0101010101010102No Hit
TGTGCCAGCACGATCCAATCTCGCATAGCAACATACGGCGAGAACATCGT11.0101010101010102No Hit
TGTGCCAGCACGATCCAATCTCGCATAGGATAAACCGGCGAGAACATGGT11.0101010101010102No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)