FastQCFastQC Report
Sun 11 Jun 2023
EGAF00008066281

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00008066281
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences109
Sequences flagged as poor quality0
Sequence length105
%GC45

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TATTCAAATAACCCTGAAACAAATGCTTAGGGATTTTATTGGTATCAGGG2522.93577981651376No Hit
CCTACATACCAAAGACGAGCGCCTTTACGCTTGCCTTTAGTACCTCGCAA1816.51376146788991No Hit
TCTGCTTATGGAAGCCAAGCATTGGGGATTGAGAAAGAGTAGAAATGCCA1311.926605504587156No Hit
TAGCAAGCACATCACCTTGAATGCCACCGGAGGCGGCTTTTTGACCGCCT109.174311926605505No Hit
AGCGCGCATAAATTTGAGCAGATTTGTCGTCACAGGTTGCGCCGCCAAAA87.339449541284404No Hit
GCGTTTGATGAATGCAATGCGACAGGCTCATGCTGATGGTTGGTTTATCG87.339449541284404No Hit
CGCTCTTTTAAAATGTCAACAAGAGAATCTCTACCATGAACAAAATGTGA65.5045871559633035No Hit
TAATAGACGCAACGCGAGCAGTAGACTCCTTCTGTTGATAAGCAAGCATC54.587155963302752No Hit
TATTCAAATAACCCTGAAACTAATGCTTAGGGATTTCATTGGTATCAGGG10.9174311926605505No Hit
ATCTCGCATAAGAAGTGGATCCTCCGGCAGGGTAAGTATTGCAGCTATTT10.9174311926605505No Hit
GCACGATCCAATCTCGCATATCACCAGAGGCTGTCAGAAAGCAACTGATA10.9174311926605505No Hit
ATCTCGCATAGCTAAAGCGCCTCCCTGCTCCCAGCCGCGCTCCCCCGCCT10.9174311926605505No Hit
ATCTCGCATATCAAAAAGTGCAGCTGTCGCTCGCTCGTGAGCCCCTTGGT10.9174311926605505No Hit
ATCTCGCATATAAGGTTACTTTGCAAGCGATTACGTTCGGTTTGGTACAA10.9174311926605505No Hit
ATCTCGCATAAATTGACCCGGCGAGAACATGGTGCGCAGGTTCTTGGTGA10.9174311926605505No Hit
ATCTCGCATAGTAGGTTAGACTCGGGCGGGCCTTGGAAGGTGAGAGCTTT10.9174311926605505No Hit
ATCTCGCATAATAGTACACCTGTTAGCACAGTATTTCACAGGGCATTCTA10.9174311926605505No Hit
TTGTACATCACGATCCAATCTCGCATAATATTATACCAGGACCCACCTTT10.9174311926605505No Hit
CCTACATACCAAAGACAAGCGCCTTTACGCTTGCCTTTAGTACCTCGCAA10.9174311926605505No Hit
ATCTCGCATACCAAATCTCCTCCTAAATTCATTCCAGCTTGAAGACATTT10.9174311926605505No Hit
AGCGCGCATAAATTTGAGCAGATTTTTCGTCACAGGTTGCGCCGCCAAAA10.9174311926605505No Hit
TAGCAAGCTCATCACCTTGAATGCCACCGGAGGCGGCTTTTTGACCGCCT10.9174311926605505No Hit
ATCTCGCATACAATGTACAGTTTTAGTTAGAAAAGTTCCAGCTCTCCAGG10.9174311926605505No Hit
ATCTCGCATAAATTGTTGGTACGACGAGCCGGCCGAATCCGTGCTCACCG10.9174311926605505No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)