FastQCFastQC Report
Sun 11 Jun 2023
EGAF00008066337

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00008066337
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences38
Sequences flagged as poor quality0
Sequence length105
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TGTGCCAGCACGATCCAATCTCGCATAGATTATCTTCTTAGCATCTCCTT12.631578947368421No Hit
TGTGCCAGCACGATCCAATCTCCCATTATACTGACCGGCTCGATGGGGTG12.631578947368421No Hit
TGTGCCAGCACGATCCAATCTCGCATATATACTAGTGGCGAGAACATGGT12.631578947368421No Hit
TGTGCCAGCACGATCAATCTCGCATAACTGAACATTTCTGCCACGACTTT12.631578947368421No Hit
TGTGCCAGCACGATCCAATCTCGCATATAAAATAATCGCATGTACTCTGA12.631578947368421No Hit
TGTGCCAGCACGATCCAATCTCGCATACTACCACTGAATTAGTCTCCGAG12.631578947368421No Hit
GGGGAAAGAACGAGAAAAGAGAGAAGAAGAAGAAGAAGGAGGGAAGAGAA12.631578947368421No Hit
TGTGCCAGCACGATCCAATCTCGCATATTAACTTTCGGTGAGATCATGGT12.631578947368421No Hit
TGTGCCAGCACGATCCAATCTCGCATAGGTTATTAGTAGACCTGGCATGG12.631578947368421No Hit
TGTGCCAGCACGATCCAATCTCGCATACTAATTAGGGGCAGCAGACACAG12.631578947368421No Hit
TGTGCCAGCACGATCCAATCTCGCATAAAACGAACCGGACTCACCATCAG12.631578947368421No Hit
TGTGCCAGCACGATCCAATCTCGCATACTTATAACCGGGCACATGGTTCC12.631578947368421No Hit
TGTGCCAGCACGATCCAATCTCGCATAACAACTGCCGGCGAGAACATGGT12.631578947368421No Hit
TGTGCCAGCACGATCCAATCTCGCATACTTAACCGGAGAGTATGTCGAAG12.631578947368421No Hit
TGTGCCAGCACGATCCAATCTCGCATAACTCCTGCACCACCCAGATGCCT12.631578947368421No Hit
TGTGCCAGCACGATCCAATCTCGCATACCACAAAGCGGCGAGAACATGGT12.631578947368421No Hit
TGTGCCAGCACGATCCAATCTCGCATATTAGTTAACGGCGAGAACATGGT12.631578947368421No Hit
TGTGCCAGCACGATCCAATCTCGCATAAGACAACGTTGCAGGTACAAGTG12.631578947368421No Hit
TGTGCCAGCACGATCCAATCTCGCATACGTTAATTGGACCCTTCTTTCAG12.631578947368421No Hit
TGTGCCAGCACGATCCAATCTCGCATAATTAGATATTCCTTACCGAGTAG12.631578947368421No Hit
TGTGCCAGCACGATCCAATCTCGCATATATTCAGATGTGTCTCCGTACTG12.631578947368421No Hit
TGTGCCAGCACGATCCAATCTCGCATATATAATCTGGTCTTTTCTTTTGC12.631578947368421No Hit
TGTGCCAGCACGATCCAATCTCGCATAAAATTTAGATCCAGCTCCTGGGA12.631578947368421No Hit
TGTGCCAGCACGATCCAATCTCGCATATCAAAAGTCTGCATCTGACTCTG12.631578947368421No Hit
TGTGCCAGCACGATCCAATCTCGCATACTTACAACGGTCTTTTCTTTTGC12.631578947368421No Hit
TGTGCCAGCACGATCCAATCTCGCATACCACCAGGTGTCTGACACATTAC12.631578947368421No Hit
TGTGCCAGCACGATCCAATCTCGCATACAAAGACATCCCTCCCAGACTTC12.631578947368421No Hit
TGTGCCAGCACGATCCAATCTCGCATAAATGAAGACACCACGAACACCCT12.631578947368421No Hit
TGTGCCAGCACGATCCAATCTCGCATACTATCTCCGCCTTATCCCAATGA12.631578947368421No Hit
AGTGCCAGCACGATCCAATCTCGCATACCACGACACAGGAAGATATGTCT12.631578947368421No Hit
TGTGCCAGCACGATCCAATCTCGCATACCACAACACAGTGTAATCAGTGT12.631578947368421No Hit
TGTGCCAGCACGATCCAATCTCGCATAGGATGTGCAACCACGAAAATCCT12.631578947368421No Hit
TGTGCCAGCACGATCCAATCTCGCATACCTCCAGGTCCCACACAGCTATC12.631578947368421No Hit
TGTGCCAGCACGATCCAATCTCGCATACGTAAACAGGAGACACACCTGGC12.631578947368421No Hit
TGTGCCAGCACGATCCAATCTCGCATACATGCACGGTCACGGAAAGCTCC12.631578947368421No Hit
TGTGCCAGCACGATCCAATCTCGCATATAAACAAGCGGCGAGAACATGGT12.631578947368421No Hit
GGAGAAAGAACGAGAAGAGCGAGAAGAAAGGGTAGAGAAGAGAGGGAGGG12.631578947368421No Hit
TGTGCCAGCACGATCCAATCTCGCATACATGAATGAGCAAAACCCATCAA12.631578947368421No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)